Molecular Dynamics-FR and SJ

Event date(s): April 08, 2025
Time(s): 01:00 PM - 04:00 PM
Category: Both Campuses
Location: Both Campuses

This is the beginner-to-intermediate level, in-depth workshop for users with no prior experience using Molecular Dynamics tools. Participants will be guided through AMBER and NAMD software for preparing and performing simulations of biomolecular systems, VMD for visualizing trajectories and manipulating PDB files, and Python for analyzing and plotting simulation data.

There will be four sessions: April 8, 10, 15 & 17, 2025 (Atlantic) from 1:00 p.m. to 4:00 p.m.

Day 1: Practical considerations for Molecular Dynamics.
Day 2: Visualizing Structures with VMD.
Day 3: Molecular Dynamics with AMBER and NAMD.
Day 4: Analyzing Molecular Dynamics Data with PYTRAJ.  

Register here.

Building: online event